dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002497_2|CGC28
Gene ID: MGYG000002497_02290
Location and strand information: 2396854 - 2398224 (+)
Family: 2.A.3.1.3
Protein type: TC
Protein description: Aromatic amino acid transport protein AroP

Gene clsuter ID: MGYG000002497_2|CGC28
Gene ID: MGYG000002497_02291
Location and strand information: 2398396 - 2399802 (+)
Family: 2.A.2.3.4
Protein type: TC
Protein description: Inner membrane symporter YicJ

Gene clsuter ID: MGYG000002497_2|CGC28
Gene ID: MGYG000002497_02292
Location and strand information: 2399802 - 2400752 (+)
Family: GH43_26|CBM42|GH43
Protein type: CAZyme
Protein description: Extracellular exo-alpha-(1->5)-L-arabinofuranosidase
Protein isoelectric point: 5.0571
Protein molecular weight: 36471.02
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002497_2|CGC28
Gene ID: MGYG000002497_02293
Location and strand information: 2400931 - 2401785 (-)
Family: 9.B.125.1.1
Protein type: TC
Protein description: Protein AmpE

Gene clsuter ID: MGYG000002497_2|CGC28
Gene ID: MGYG000002497_02294
Location and strand information: 2401782 - 2402345 (-)
Family: null
Protein type: null
Protein description: 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD

Gene clsuter ID: MGYG000002497_2|CGC28
Gene ID: MGYG000002497_02295
Location and strand information: 2402483 - 2403376 (+)
Family: null
Protein type: null
Protein description: Nicotinate-nucleotide pyrophosphorylase [carboxylating]

Gene clsuter ID: MGYG000002497_2|CGC28
Gene ID: MGYG000002497_02296
Location and strand information: 2403558 - 2403989 (+)
Family: 3.A.15.2.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002497_2|CGC28
Gene ID: MGYG000002497_02297
Location and strand information: 2404000 - 2405385 (+)
Family: 3.A.15.2.1
Protein type: TC
Protein description: Type II secretion system protein E

Gene clsuter ID: MGYG000002497_2|CGC28
Gene ID: MGYG000002497_02298
Location and strand information: 2405375 - 2406580 (+)
Family: 3.A.15.2.1
Protein type: TC
Protein description: Putative type II secretion system protein F

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002497_02290	Aromatic amino acid transport protein AroP	TC	2396854	2398224	+	2.A.3.1.3
MGYG000002497_02291	Inner membrane symporter YicJ	TC	2398396	2399802	+	2.A.2.3.4
MGYG000002497_02292	Extracellular exo-alpha-(1->5)-L-arabinofuranosidase	CAZyme	2399802	2400752	+	GH43_26\| CBM42\| GH43
MGYG000002497_02293	Protein AmpE	TC	2400931	2401785	-	9.B.125.1.1
MGYG000002497_02294	1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	null	2401782	2402345	-	Amidase_2
MGYG000002497_02295	Nicotinate-nucleotide pyrophosphorylase [carboxylating]	null	2402483	2403376	+	QRPTase_N\| QRPTase_C
MGYG000002497_02296	hypothetical protein	TC	2403558	2403989	+	3.A.15.2.1
MGYG000002497_02297	Type II secretion system protein E	TC	2404000	2405385	+	3.A.15.2.1
MGYG000002497_02298	Putative type II secretion system protein F	TC	2405375	2406580	+	3.A.15.2.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature